BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D08LP1|AL429057
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1122 1171 0.0
3x_Contig1680 252 8e-67
>3x_Contig1122
Length = 4483
Score = 1171 bits (590), Expect = 0.0
Identities = 600/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 1 gatcatattacagaggctatagagaagggacgaaacaaacggacggtaagaatacagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 gatcatattacagaggctatagagaagggacgaaacaaacggacggtaagaatacagata 3940
Query: 61 gtagtcaagcgatgatgaatgaattgccgcagttagcagtactacttcgttgtcagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 gtagtcaagcgatgatgaatgaattgccgcagttagcagtactacttcgttgtcagacaa 4000
Query: 121 tcctcagttgaggcagtattatgataagtttttgtttaagaacagcagtggcaagtcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4001 tcctcagttgaggcagtattatgataagtttttgtttaagaacagcagtcgcaagtcgct 4060
Query: 181 atcggacttgccagcaaaagcaagggaacaggctaggagtaatctcaatccggaggaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 atcggacttgccagcaaaagcaagggaacaggctaggagtaatctcaatccggaggaagg 4120
Query: 241 gtttagttctgggacttggacaggcactggtgctagtctagataattcggttgggcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 gtttagttctgggacttggacaggcactggtgctagtctagataattcggttgggcaagg 4180
Query: 301 tcgtggtcaaagtcaagggcaaggacaagggcaagggcaagggcaagggcagggccaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 tcgtggtcaaagtcaagggcaaggacaagggcaagggcaagggcaagggcagggccaaaa 4240
Query: 361 tcaaagtcaacgccaaagtcaaggtcaaggtcatgctaccggcactggacctggtaacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 tcaaagtcaacgccaaagtcaaggtcaaggtcatgctaccggcactggacctggtaacgt 4300
Query: 421 tgattttattagtggtttcaggaatcccatgtaccaaatggatgcttctcctatctcgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4301 tgattttattagtggtttcaggaatcccatgtaccaaatggatgcttctcctatctcgag 4360
Query: 481 ttcaggatcacataatcgcgccagtatgtcattttcggatgctatgggtggtcctcaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361 ttcaggatcacataatcgcgccagtatgtcattttcggatgctatgggtggtcctcaggc 4420
Query: 541 agctgcggctgttggtgggccaatgggtggttccattccagaaccagttccaggctcctc 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4421 agctgcggctgttggtgggcc-atgggtggttccattccagaaccagttccaggctcctc 4479
Query: 601 tt 602
||
Sbjct: 4480 tt 4481
>3x_Contig1680
Length = 12597
Score = 252 bits (127), Expect = 8e-67
Identities = 134/137 (97%)
Strand = Plus / Plus
Query: 747 cccctcatttgcaagcgcaagtwccgtatggtccaggccctggtgttcctggaaacatgg 806
|||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 7 cccctcatatgcaagcgcaagtaccgtatggtccaggccctggagttcctggaaacatgg 66
Query: 807 catcagcttctatacaacagggtcaagtccaaggcggaggttccagaggtgcccctcatt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 catcagcttctatacaacagggtcaagtccaaggcggaggttccagaggtgcccctcatt 126
Query: 867 ctagaaataactcagtc 883
|||||||||||||||||
Sbjct: 127 ctagaaataactcagtc 143
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4794
Number of Sequences: 1807
Number of extensions: 4794
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 2
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)